Information for 9-ATACTCAWAATATGRG (Motif 18)

C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
Reverse Opposite:
A G T C A G C T A T G C G C T A A C G T G C T A C G A T A C G T C G T A C G A T A C T G G C T A A T C G C G A T C T G A C G A T
p-value:1e-6
log p-value:-1.410e+01
Information Content per bp:1.692
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.5 +/- 29.5bp
Average Position of motif in Background51.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATACTCAWAATATGRG
AAAGCTCGTAAAATTT-
 A C G T C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATACTCAWAATATGRG
AAACCTCGTAAAATTT-
 A C G T C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATACTCAWAATATGRG
--CCYMATAAAA----
 C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:ATACTCAWAATATGRG
--GCTCGTAAAAA---
 C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATACTCAWAATATGRG
SSAATCCACANN-------
 A C G T A C G T A C G T C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----ATACTCAWAATATGRG
GACCACATTCATACAAT---
 A C G T A C G T A C G T A C G T C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:ATACTCAWAATATGRG
-----CCATATATGG-
 C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:ATACTCAWAATATGRG-
-----CCATATATGGNA
 C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ATACTCAWAATATGRG
AGCCACTCAAG-------
 A C G T A C G T C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-ATACTCAWAATATGRG
AATATGCAAATTAG---
 A C G T C G T A A G C T C G T A A T G C C G A T A G T C C G T A C G A T G T C A C G T A C G A T G T C A C G A T A T C G C T G A C T A G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T