Information for 12-AWGYCWKAGGRRG (Motif 17)

C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G
Reverse Opposite:
G T A C A G T C A G C T A G T C A G T C A C G T G T A C C G T A A C T G C T G A A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.822
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.8 +/- 23.7bp
Average Position of motif in Background54.0 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AWGYCWKAGGRRG
-TGCCTGAGGCN-
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AWGYCWKAGGRRG
-NGCCTGAGGCN-
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AWGYCWKAGGRRG
-AGCCTCAGGCA-
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AWGYCWKAGGRRG-
ATTGCCTGAGGCAAT
 A C G T C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AWGYCWKAGGRRG-----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AWGYCWKAGGRRG
-TGCCCNGGGGCA
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AWGYCWKAGGRRG-
ATTGCCTGAGGCGAA
 A C G T C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AWGYCWKAGGRRG-
--SCCTSAGGSCAW
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AWGYCWKAGGRRG--
-----AGAGGAAGTG
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AWGYCWKAGGRRG-
NTGCCCTAGGGCAA
 C G T A C G A T A C T G A G C T A G T C C G A T A C T G C G T A A C T G C T A G C T G A C T A G A C T G A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A