Information for 4-GCTAWGCATT (Motif 16)

T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A C G A T T A C G A T G C C G T A C A G T C T G A A C T G A G T C
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.773
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif166.5
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets46.7 +/- 28.5bp
Average Position of motif in Background51.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTAWGCATT--
GTTAATNATTAA
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTAWGCATT------
NNCATTCATTCATNNN
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTAWGCATT---
--TGTGGATTNNN
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTAWGCATT----
ANTATCGATTTTTN
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTAWGCATT---
---VRGGATTARN
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTAWGCATT
GHATATKCAT-
 A C G T T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTAWGCATT--
NNTGTGGATTSS
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTAWGCATT-----
AAAATATGCATAATAAA
 A C G T A C G T T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTAWGCATT-
---NGGGATTA
 T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

HNF1A/MA0046.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTAWGCATT----
NGTTAATNATTAACN
 A C G T T C A G A G T C A G C T G T C A C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T