Information for 9-GGTKCTGAACMCA (Motif 11)

A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
Reverse Opposite:
C G A T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G G T A C C G T A A G T C A G T C
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.923
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 20.6bp
Average Position of motif in Background50.6 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.56
Offset:-12
Orientation:reverse strand
Alignment:------------GGTKCTGAACMCA
GGCGCTGTCCATGGTGCTGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTKCTGAACMCA----
TGTCGTGACCCCTTAAT
 A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.53
Offset:-12
Orientation:forward strand
Alignment:------------GGTKCTGAACMCA
GGAGCTGTCCATGGTGCTGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGTKCTGAACMCA
---ACTGAAACCA
 A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGTKCTGAACMCA
--TGCTGACTCA-
 A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGTKCTGAACMCA
AATTTGCTGAC----
 A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGTKCTGAACMCA
BCNGGTTCTAGANCN-
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGTKCTGAACMCA----
NNANTTGACCCCTNNNN
 A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGTKCTGAACMCA----
NNNNTTGACCCCTNNNN
 A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGTKCTGAACMCA
GGTGYTGACAGS-
 A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C G T A C G T A C C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T