p-value: | 1e-15 |
log p-value: | -3.587e+01 |
Information Content per bp: | 1.621 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 8.44% |
Number of Background Sequences with motif | 260.1 |
Percentage of Background Sequences with motif | 0.59% |
Average Position of motif in Targets | 49.2 +/- 25.8bp |
Average Position of motif in Background | 52.0 +/- 37.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.90 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | BGTTGCCATGGYA- NGTTGCCATGGCAA |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.89 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | BGTTGCCATGGYA- GGTTGCCATGGCAA |
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RFX5/MA0510.2/Jaspar
Match Rank: | 3 |
Score: | 0.86 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | BGTTGCCATGGYA--- CGTTGCCATGGCAACG |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 4 |
Score: | 0.86 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | BGTTGCCATGGYA-- -GTTGCCATGGNAAC |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 5 |
Score: | 0.85 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | BGTTGCCATGGYA-- KGTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 6 |
Score: | 0.84 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -BGTTGCCATGGYA-- CGGTTGCCATGGCAAC |
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RFX3/MA0798.1/Jaspar
Match Rank: | 7 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | BGTTGCCATGGYA--- CGTTGCCATGGCAACN |
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RFX2/MA0600.2/Jaspar
Match Rank: | 8 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | BGTTGCCATGGYA--- CGTTGCCATGGCAACG |
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RFX4/MA0799.1/Jaspar
Match Rank: | 9 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | BGTTGCCATGGYA--- CGTTGCCATGGCAACN |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 10 |
Score: | 0.79 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --BGTTGCCATGGYA NNCGTTGCTATGGNN |
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