Information for 1-ATCTGTTGCCAGA (Motif 6)

C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A A T G C C G T A A C T G C G T A A G C T
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 28.3bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:ATCTGTTGCCAGA--
-----ATGCCAGACN
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATCTGTTGCCAGA-
--CTGTTGCTAGGS
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ATCTGTTGCCAGA
-----TTGCCAAG
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATCTGTTGCCAGA
--CTGTTTAC---
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCTGTTGCCAGA
ACCATCTGTT------
 A C G T A C G T A C G T C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATCTGTTGCCAGA
----CGTGCCAAG
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ATCTGTTGCCAGA
------TGCCAA-
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGTTGCCAGA
CAGCTGTTTCCT--
 A C G T C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATCTGTTGCCAGA
CCACCTGTTGCAT--
 A C G T A C G T C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCTGTTGCCAGA-----
-NSTGTTTRCWCAGBNNN
 C T G A A C G T A G T C A C G T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G