Information for 12-TGTCAATGTCTGAGGA (Motif 28)

A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-9.993e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 25.2bp
Average Position of motif in Background61.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATGTCTGAGGA
CCTGTCAA----------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAATGTCTGAGGA
NTGTCAN----------
 A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGTCAATGTCTGAGGA
NNNCAGCTGTCAATATN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATGTCTGAGGA
GCTGTCAA----------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------TGTCAATGTCTGAGGA
AAGCACCTGTCAATAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATGTCTGAGGA
RHTGWCAR----------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGTCAATGTCTGAGGA--
-NNTNNTGTCTGGNNTNG
 A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGTCAATGTCTGAGGA
-----TWGTCTGV---
 A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------TGTCAATGTCTGAGGA
AAAGACCTGTCAATAC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGTCAATGTCTGAGGA
-----CTGTCTGG---
 A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T