Information for 8-GGAGTAAVAHTTH (Motif 16)

A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
Reverse Opposite:
C A T G C T G A C G T A C A T G A C G T A C T G A C G T A C G T C G T A A G T C A G C T A G T C A G T C
p-value:1e-7
log p-value:-1.714e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.4 +/- 32.2bp
Average Position of motif in Background41.8 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAAVAHTTH
TTAGAGGGATTAACAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAGTAAVAHTTH
GGAAGTGAAAST--
 A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAAVAHTTH
TGAGGGGGATTAACTAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGAGTAAVAHTTH
----NAACAAT--
 A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGTAAVAHTTH
NNAAGGGATTAACGANT-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAAVAHTTH
TGAGGGGGATTAACTAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTAAVAHTTH
TGAAGGGATTAATCATC-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C A C G T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTAAVAHTTH
TGTAGGGATTAATTGTC-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAGTAAVAHTTH
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTAAVAHTTH
AGAGGGGATTAATTTAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A C T G A C G T C G T A C G T A T A G C C G T A G A T C A C G T A G C T G A T C
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T A C G T