Information for 13-CGCTAAGGGAGCT (Motif 23)

A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A T G C A G T C A G T C A C G T C A G T C G T A A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 20.8bp
Average Position of motif in Background41.5 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CGCTAAGGGAGCT
------CGGAGC-
 A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCTAAGGGAGCT
-GGTTAGAGACCT
 A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCTAAGGGAGCT
TGCTGASTCAGC-
 A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCTAAGGGAGCT---
NNNTTAGGTAGCNTNT
 A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

MAFG/MA0659.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CGCTAAGGGAGCT----
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCTAAGGGAGCT
ATGCCCTGAGGC----
 A C G T A C G T A C G T A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTAAGGGAGCT--
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAAGGGAGCT
WTGSCCTSAGGS----
 A C G T A C G T A C G T A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CGCTAAGGGAGCT
--------CAGCC
 A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGCTAAGGGAGCT
--CTAATKGV---
 A G T C A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A C G T
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T