Information for 11-AGACCAGCCCGGG (Motif 20)

C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C T A G A C T G A C T G A G T C A C G T A C T G C T A G A G C T A G T C A C G T
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.9 +/- 28.3bp
Average Position of motif in Background49.0 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGACCAGCCCGGG---
--ACATGCCCGGGCAT
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGACCAGCCCGGG----
--NCCCCCCCGGGGGGN
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGACCAGCCCGGG----
--ACCCCCCCGGGGGGN
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACCAGCCCGGG----
---CCCCCCCGGGGGNN
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGACCAGCCCGGG
GGACCACCCACG-
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGACCAGCCCGGG-
GGGGCTYGKCTGGGA
 A C G T C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGACCAGCCCGGG
GGCCCCGCCCCC-
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGACCAGCCCGGG
NAGCCCCGCCCCCN
 A C G T C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGACCAGCCCGGG---
-DCHCAGCAGGRGGCC
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGACCAGCCCGGG
----CAGCC----
 C G T A A C T G T C G A A G T C A G T C G T C A A C T G A G T C A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T