Information for 7-GCAGCAGCGAYTC (Motif 13)

A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
Reverse Opposite:
T A C G C G T A T C G A G C A T G T A C C T A G A G T C C A G T A C T G G T A C A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.789
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets37.7 +/- 22.5bp
Average Position of motif in Background43.2 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCAGCAGCGAYTC
---GCAGTGATTT
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAGCGAYTC
CGCAGCTGCG----
 A C G T A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGCAGCGAYTC
--TGCTGTGATTT
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAGCAGCGAYTC
-CAGCTGNT----
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCAGCAGCGAYTC
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCAGCAGCGAYTC
----CAGCC----
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGCGAYTC
AGCAGCTGCTNN--
 A C G T A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCAGCAGCGAYTC
--AGCAGCTGCT-
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAGCAGCGAYTC
NCAGCTGCTG---
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCAGCAGCGAYTC
--CACAGN-----
 A T C G T G A C T G C A A C T G A G T C G T C A A C T G A G T C A C T G C G T A A G C T A C G T A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T