Information for 5-GGCCTCCTTAGCCCCG (Motif 7)

A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
Reverse Opposite:
G T A C C A T G A C T G A C T G A T C G G T A C G C A T C G T A G T C A C A T G A C T G C T G A A C T G A C T G G T A C T A G C
p-value:1e-14
log p-value:-3.226e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 25.0bp
Average Position of motif in Background59.3 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGCCTCCTTAGCCCCG
--CCCCCTTGGGCCCC
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCCTCCTTAGCCCCG
--TGACCTTTGCCCTA
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GGCCTCCTTAGCCCCG---
---------TGCCCAGNHW
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGCCTCCTTAGCCCCG
--TGACCTTTGCCCCA
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGCCTCCTTAGCCCCG-
--TGACCTTTGCCCTAN
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCCTTAGCCCCG
TGWCCTCARNTGACC--
 A C G T A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGCCTCCTTAGCCCCG
---AACCTTATAT---
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGCCTCCTTAGCCCCG
---CCGATTGGCT---
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGCCTCCTTAGCCCCG
--GCTAATTAGC----
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GGCCTCCTTAGCCCCG
---BCMATTAG-----
 A C T G A C T G T A G C A G T C G A C T T G A C G T A C A C G T A C G T C G T A A C T G A T G C A G T C G T A C G T A C C A T G
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T