Information for 2-SNTRCCAAGGTGAGAG (Motif 3)

A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
Reverse Opposite:
A G T C A G C T A G T C A C G T A G T C C G T A G T A C A G T C A C G T A C G T A C T G A C T G G A T C C T G A A C G T A T G C
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.792
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 23.4bp
Average Position of motif in Background54.8 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.65
Offset:7
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
-------AGGTGTGA-
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.64
Offset:6
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
------AAGGTGTGAA
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:SNTRCCAAGGTGAGAG
------CAGGTGAGG-
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.64
Offset:7
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
-------AGGTGTGA-
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.64
Offset:6
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG-
------CAGGTAAGTAT
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
-------AGGTGTGA-
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.63
Offset:6
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG---
------AAGGTGTGAAAAT
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.63
Offset:7
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
-------AGGTGTGA-
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
-------AGGTGTGA-
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:SNTRCCAAGGTGAGAG
---BTCAAGGTCA---
 A T C G C G T A A G C T C T A G A G T C A G T C G T C A C G T A A C T G A C T G C G A T C T A G G T C A A C T G C T G A C T A G
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T