Information for 10-GGTGGTGCTGTCTCCC (Motif 13)

A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
Reverse Opposite:
A C T G T C A G A T C G C G T A A C T G C T G A G T A C T C G A C A T G A G T C G T C A G T A C A G T C C G T A G T A C T A G C
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.686
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.6 +/- 25.7bp
Average Position of motif in Background56.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTGCTGTCTCCC
AGATGCTRCTRCCHT--
 A C G T A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTGCTGTCTCCC-
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A C G T A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTGGTGCTGTCTCCC
GGNGCGNCTGTTNNN-
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGTGGTGCTGTCTCCC----
-------CTGTCTGTCACCT
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGTGGTGCTGTCTCCC
-------CTGTCTGG-
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGTGGTGCTGTCTCCC----
--------TGTCTGDCACCT
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGTGGTGCTGTCTCCC
-----TGCTGACTCA-
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGTGGTGCTGTCTCCC
-----VBSYGTCTGG-
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GGTGGTGCTGTCTCCC
------GCTGTG----
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GGTGGTGCTGTCTCCC--
------NCTGTCAATCAN
 A C T G A C T G G C A T A C T G A C T G A C G T T C A G G T A C A C G T A C T G G A C T T A G C C G A T T A G C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A