Information for 3-CACAGACTGTGGT (Motif 11)

A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T
Reverse Opposite:
C T G A G A T C T A G C C T G A A T G C C G T A A C T G C G A T A G T C C A G T A C T G A C G T A C T G
p-value:1e-12
log p-value:-2.830e+01
Information Content per bp:1.744
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif28.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.0 +/- 22.2bp
Average Position of motif in Background45.3 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACAGACTGTGGT-
GVACAGNMTGTYCTB
 A C G T A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACAGACTGTGGT
-ACAGGATGTGGT
 A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAGACTGTGGT
CACAGN-------
 A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CACAGACTGTGGT---
----NNHTGTGGTTWN
 A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACAGACTGTGGT-
AGNACAGNCTGTTCTN
 A C G T A C G T A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACAGACTGTGGT-
GRACAGWMTGTYCTB
 A C G T A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACAGACTGTGGT
AAACCACAGAN------
 A C G T A C G T A C G T A C G T A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACAGACTGTGGT-
AGNACANNNTGTNCTN
 A C G T A C G T A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CACAGACTGTGGT---
------CTGTGGTTTN
 A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACAGACTGTGGT-
GAACADWATGTTCTT
 A C G T A G T C G T C A G T A C G T C A A C T G G C T A T A G C C G A T A T C G A G C T A T C G C A T G A G C T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T