Information for 6-GMKTCCWGSCKCCGMC (Motif 13)

A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C
Reverse Opposite:
A C T G C A G T A T G C A C T G A C T G T G A C A C T G A T C G A G T C G C A T A C T G A C T G C T G A G T A C A C T G A G T C
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.845
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.9 +/- 26.5bp
Average Position of motif in Background63.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GMKTCCWGSCKCCGMC-
--GCCCCGCCCCCTCCC
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GMKTCCWGSCKCCGMC----
GCCTCCTCCMTCWGACTGKS
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GMKTCCWGSCKCCGMC---
-------GGCCCCGCCCCC
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GMKTCCWGSCKCCGMC----
--------GCTCCGCCCMCY
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GMKTCCWGSCKCCGMC
--CCCCCGCCCCCGCC
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GMKTCCWGSCKCCGMC
--TTCCCGCCWG----
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GMKTCCWGSCKCCGMC--
-NNNNTTGGCGCCGANNN
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GMKTCCWGSCKCCGMC
CACTTCCTGT-------
 A C G T A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GMKTCCWGSCKCCGMC--
-NNNNTTGGCGCCGANNN
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GMKTCCWGSCKCCGMC
--------GCTCCG--
 A C T G G T A C A C T G A G C T A G T C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A G T C A T C G G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T