Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-133 | -3.075e+02 | 0.0000 | 282.0 | 32.27% | 2601.9 | 5.45% | motif file (matrix) |
svg |
2 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-97 | -2.239e+02 | 0.0000 | 205.0 | 23.46% | 1810.2 | 3.79% | motif file (matrix) |
svg |
3 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-93 | -2.158e+02 | 0.0000 | 235.0 | 26.89% | 2579.1 | 5.40% | motif file (matrix) |
svg |
4 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-28 | -6.614e+01 | 0.0000 | 137.0 | 15.68% | 2526.9 | 5.29% | motif file (matrix) |
svg |
5 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-28 | -6.545e+01 | 0.0000 | 138.0 | 15.79% | 2576.6 | 5.40% | motif file (matrix) |
svg |
6 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-21 | -5.025e+01 | 0.0000 | 116.0 | 13.27% | 2289.5 | 4.80% | motif file (matrix) |
svg |
7 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-19 | -4.579e+01 | 0.0000 | 83.0 | 9.50% | 1379.6 | 2.89% | motif file (matrix) |
svg |
8 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-18 | -4.282e+01 | 0.0000 | 76.0 | 8.70% | 1243.0 | 2.60% | motif file (matrix) |
svg |
9 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.176e+01 | 0.0000 | 75.0 | 8.58% | 1238.7 | 2.59% | motif file (matrix) |
svg |
10 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-14 | -3.422e+01 | 0.0000 | 71.0 | 8.12% | 1304.3 | 2.73% | motif file (matrix) |
svg |
11 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-14 | -3.355e+01 | 0.0000 | 369.0 | 42.22% | 14174.7 | 29.69% | motif file (matrix) |
svg |
12 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-13 | -3.212e+01 | 0.0000 | 57.0 | 6.52% | 937.8 | 1.96% | motif file (matrix) |
svg |
13 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-11 | -2.727e+01 | 0.0000 | 28.0 | 3.20% | 281.3 | 0.59% | motif file (matrix) |
svg |
14 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-11 | -2.649e+01 | 0.0000 | 20.0 | 2.29% | 138.0 | 0.29% | motif file (matrix) |
svg |
15 |
| GFX(?)/Promoter/Homer | 1e-7 | -1.818e+01 | 0.0000 | 9.0 | 1.03% | 32.8 | 0.07% | motif file (matrix) |
svg |
16 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-7 | -1.707e+01 | 0.0000 | 30.0 | 3.43% | 505.8 | 1.06% | motif file (matrix) |
svg |
17 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.655e+01 | 0.0000 | 41.0 | 4.69% | 864.0 | 1.81% | motif file (matrix) |
svg |
18 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.575e+01 | 0.0000 | 82.0 | 9.38% | 2437.0 | 5.10% | motif file (matrix) |
svg |
19 |
| E-box(bHLH)/Promoter/Homer | 1e-6 | -1.410e+01 | 0.0000 | 18.0 | 2.06% | 238.6 | 0.50% | motif file (matrix) |
svg |
20 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-5 | -1.356e+01 | 0.0000 | 11.0 | 1.26% | 90.1 | 0.19% | motif file (matrix) |
svg |
21 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.325e+01 | 0.0000 | 57.0 | 6.52% | 1584.8 | 3.32% | motif file (matrix) |
svg |
22 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.322e+01 | 0.0000 | 120.0 | 13.73% | 4253.9 | 8.91% | motif file (matrix) |
svg |
23 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.267e+01 | 0.0000 | 87.0 | 9.95% | 2851.5 | 5.97% | motif file (matrix) |
svg |
24 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-5 | -1.257e+01 | 0.0001 | 49.0 | 5.61% | 1311.2 | 2.75% | motif file (matrix) |
svg |
25 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.208e+01 | 0.0001 | 101.0 | 11.56% | 3507.1 | 7.35% | motif file (matrix) |
svg |
26 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-5 | -1.205e+01 | 0.0001 | 14.0 | 1.60% | 173.1 | 0.36% | motif file (matrix) |
svg |
27 |
| CRE(bZIP)/Promoter/Homer | 1e-4 | -1.113e+01 | 0.0002 | 27.0 | 3.09% | 578.2 | 1.21% | motif file (matrix) |
svg |
28 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-4 | -1.105e+01 | 0.0002 | 52.0 | 5.95% | 1509.6 | 3.16% | motif file (matrix) |
svg |
29 |
| ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.102e+01 | 0.0002 | 13.0 | 1.49% | 165.1 | 0.35% | motif file (matrix) |
svg |
30 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-4 | -1.066e+01 | 0.0003 | 30.0 | 3.43% | 698.2 | 1.46% | motif file (matrix) |
svg |
31 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-4 | -1.046e+01 | 0.0003 | 135.0 | 15.45% | 5218.4 | 10.93% | motif file (matrix) |
svg |
32 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.017e+01 | 0.0004 | 17.0 | 1.95% | 290.4 | 0.61% | motif file (matrix) |
svg |
33 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.722e+00 | 0.0007 | 46.0 | 5.26% | 1347.6 | 2.82% | motif file (matrix) |
svg |
34 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-4 | -9.349e+00 | 0.0009 | 35.0 | 4.00% | 938.5 | 1.97% | motif file (matrix) |
svg |
35 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -9.297e+00 | 0.0010 | 25.0 | 2.86% | 575.3 | 1.20% | motif file (matrix) |
svg |
36 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -9.199e+00 | 0.0010 | 31.0 | 3.55% | 795.2 | 1.67% | motif file (matrix) |
svg |
37 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -8.865e+00 | 0.0014 | 101.0 | 11.56% | 3812.3 | 7.99% | motif file (matrix) |
svg |
38 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.722e+00 | 0.0016 | 89.0 | 10.18% | 3278.4 | 6.87% | motif file (matrix) |
svg |
39 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.687e+00 | 0.0016 | 20.0 | 2.29% | 426.9 | 0.89% | motif file (matrix) |
svg |
40 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-3 | -7.569e+00 | 0.0047 | 155.0 | 17.73% | 6554.3 | 13.73% | motif file (matrix) |
svg |
41 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.559e+00 | 0.0047 | 38.0 | 4.35% | 1156.7 | 2.42% | motif file (matrix) |
svg |
42 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -7.494e+00 | 0.0048 | 91.0 | 10.41% | 3500.5 | 7.33% | motif file (matrix) |
svg |
43 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.219e+00 | 0.0062 | 64.0 | 7.32% | 2298.2 | 4.81% | motif file (matrix) |
svg |
44 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-3 | -6.967e+00 | 0.0078 | 126.0 | 14.42% | 5229.4 | 10.95% | motif file (matrix) |
svg |
45 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.897e+00 | 0.0082 | 32.0 | 3.66% | 954.0 | 2.00% | motif file (matrix) |
svg |
46 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -6.844e+00 | 0.0084 | 86.0 | 9.84% | 3342.9 | 7.00% | motif file (matrix) |
svg |
47 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.802e+00 | 0.0086 | 79.0 | 9.04% | 3022.5 | 6.33% | motif file (matrix) |
svg |
48 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -6.719e+00 | 0.0092 | 172.0 | 19.68% | 7533.1 | 15.78% | motif file (matrix) |
svg |
49 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.691e+00 | 0.0092 | 30.0 | 3.43% | 886.5 | 1.86% | motif file (matrix) |
svg |
50 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.577e+00 | 0.0101 | 67.0 | 7.67% | 2496.4 | 5.23% | motif file (matrix) |
svg |
51 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -6.354e+00 | 0.0124 | 8.0 | 0.92% | 118.4 | 0.25% | motif file (matrix) |
svg |
52 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.347e+00 | 0.0124 | 23.0 | 2.63% | 630.7 | 1.32% | motif file (matrix) |
svg |
53 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -6.255e+00 | 0.0132 | 9.0 | 1.03% | 148.4 | 0.31% | motif file (matrix) |
svg |
54 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-2 | -6.166e+00 | 0.0141 | 9.0 | 1.03% | 150.8 | 0.32% | motif file (matrix) |
svg |
55 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.123e+00 | 0.0145 | 68.0 | 7.78% | 2590.6 | 5.43% | motif file (matrix) |
svg |
56 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.114e+00 | 0.0145 | 26.0 | 2.97% | 760.9 | 1.59% | motif file (matrix) |
svg |
57 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -5.967e+00 | 0.0164 | 45.0 | 5.15% | 1570.6 | 3.29% | motif file (matrix) |
svg |
58 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.921e+00 | 0.0168 | 56.0 | 6.41% | 2064.1 | 4.32% | motif file (matrix) |
svg |
59 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.837e+00 | 0.0180 | 21.0 | 2.40% | 579.4 | 1.21% | motif file (matrix) |
svg |
60 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.783e+00 | 0.0187 | 44.0 | 5.03% | 1542.5 | 3.23% | motif file (matrix) |
svg |
61 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.768e+00 | 0.0187 | 12.0 | 1.37% | 255.8 | 0.54% | motif file (matrix) |
svg |
62 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.746e+00 | 0.0188 | 32.0 | 3.66% | 1029.3 | 2.16% | motif file (matrix) |
svg |
63 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.737e+00 | 0.0188 | 25.0 | 2.86% | 742.8 | 1.56% | motif file (matrix) |
svg |
64 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.666e+00 | 0.0197 | 58.0 | 6.64% | 2181.2 | 4.57% | motif file (matrix) |
svg |
65 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-2 | -5.664e+00 | 0.0197 | 22.0 | 2.52% | 627.3 | 1.31% | motif file (matrix) |
svg |
66 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.597e+00 | 0.0205 | 56.0 | 6.41% | 2097.1 | 4.39% | motif file (matrix) |
svg |
67 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.538e+00 | 0.0214 | 93.0 | 10.64% | 3841.4 | 8.05% | motif file (matrix) |
svg |
68 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.194e+00 | 0.0297 | 18.0 | 2.06% | 496.7 | 1.04% | motif file (matrix) |
svg |
69 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.185e+00 | 0.0297 | 12.0 | 1.37% | 275.5 | 0.58% | motif file (matrix) |
svg |
70 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.139e+00 | 0.0305 | 15.0 | 1.72% | 385.9 | 0.81% | motif file (matrix) |
svg |
71 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.117e+00 | 0.0307 | 15.0 | 1.72% | 386.7 | 0.81% | motif file (matrix) |
svg |
72 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.069e+00 | 0.0318 | 9.0 | 1.03% | 178.7 | 0.37% | motif file (matrix) |
svg |
73 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -4.961e+00 | 0.0349 | 15.0 | 1.72% | 393.9 | 0.83% | motif file (matrix) |
svg |
74 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.918e+00 | 0.0360 | 12.0 | 1.37% | 285.7 | 0.60% | motif file (matrix) |
svg |
75 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -4.770e+00 | 0.0412 | 26.0 | 2.97% | 846.6 | 1.77% | motif file (matrix) |
svg |
76 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -4.668e+00 | 0.0450 | 21.0 | 2.40% | 645.4 | 1.35% | motif file (matrix) |
svg |
77 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -4.665e+00 | 0.0450 | 12.0 | 1.37% | 295.8 | 0.62% | motif file (matrix) |
svg |
78 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -4.612e+00 | 0.0463 | 169.0 | 19.34% | 7788.4 | 16.31% | motif file (matrix) |
svg |