Information for 9-ACCAATTGGTTGT (Motif 8)

C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T
Reverse Opposite:
C G T A A T G C C T G A C T G A G T A C A G T C C G T A C G T A A G C T A C G T C T A G A C T G G A C T
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.1 +/- 15.8bp
Average Position of motif in Background61.1 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACCAATTGGTTGT
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ACCAATTGGTTGT-
GNNTTAATTGGTTGTT
 A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACCAATTGGTTGT
-CCGATTGGCT--
 C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ACCAATTGGTTGT-
TNCACTAATTAGTNNNN
 A C G T A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T A C G T
C G A T T G C A T G A C T G C A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A G C T A C T G T A C G G A T C C G T A

PH0007.1_Barx1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ACCAATTGGTTGT
ATNNACTAATTACTTT-
 A C G T A C G T A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCAATTGGTTGT-
NNNTTAATTGGTTTTT
 A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACCAATTGGTTGT---
-CTGATTGGTCNATTT
 C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PH0109.1_Nkx1-1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ACCAATTGGTTGT
NCCCACTAATTAGCGCA
 A C G T A C G T A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCAATTGGTTGT-
NNNTTAATTGGTTTTN
 A C G T A C G T C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACCAATTGGTTGT
--CCATTGTTC--
 C G T A G T A C A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G C T A G C T A T C G C G A T
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T