Information for 4-GCGGGAAGCC (Motif 3)

A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
Reverse Opposite:
A C T G C T A G G A T C A G C T A C G T A G T C A T G C A G T C C A T G A T G C
p-value:1e-17
log p-value:-3.916e+01
Information Content per bp:1.840
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.61%
Number of Background Sequences with motif593.5
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets50.4 +/- 24.0bp
Average Position of motif in Background50.5 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCGGGAAGCC
GGCGGGAARN-
 A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GCGGGAAGCC
GGGCGGGAAGG-
 A C G T A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GCGGGAAGCC
GGGCGGGAAGG-
 A C G T A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GCGGGAAGCC
CWGGCGGGAA---
 A C G T A C G T A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGAAGCC
TGGCGGGAAAHB
 A C G T A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCGGGAAGCC
GGCGGGAAAH-
 A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GCGGGAAGCC
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCGGGAAGCC--
GGGGGAATCCCC
 A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C A C G T A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCGGGAAGCC
---NGAAGC-
 A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCGGGAAGCC
DCCGGAARYN
 A T C G G T A C T C A G A T C G A C T G G T C A C T G A C T A G A G T C A G T C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G