Information for 9-CATATGAATG (Motif 18)

G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
Reverse Opposite:
A T G C G C T A C G A T A C G T G T A C G C T A A G C T C T G A G C A T C A T G
p-value:1e-6
log p-value:-1.526e+01
Information Content per bp:1.660
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif8.81%
Number of Background Sequences with motif2264.8
Percentage of Background Sequences with motif4.74%
Average Position of motif in Targets46.7 +/- 27.3bp
Average Position of motif in Background50.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CATATGAATG-----
NTTNTATGAATGTGNNC
 A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CATATGAATG-
NNTNTCATGAATGT
 A C G T A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CATATGAATG
GHATATKCAT-
 A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CATATGAATG------
ACTATGAATGAATGAT
 G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CATATGAATG
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CATATGAATG
AYATGYATATGCATR
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CATATGAATG
ATTTGCATAACAATG
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATATGAATG
ACATATGG---
 A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATATGAATG
NACATATGGN--
 A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATATGAATG
AACATATGTT--
 A C G T A C G T G T A C C G T A G A C T T C G A C G A T C A T G T G C A G C T A C G A T T A C G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T