Information for 9-TTGTGAGCYTGTT (Motif 5)

G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
Reverse Opposite:
C T G A T C G A G T A C C G T A T C G A A C T G T G A C C G A T A G T C C G T A G T A C C G T A C T G A
p-value:1e-13
log p-value:-3.001e+01
Information Content per bp:1.727
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets46.9 +/- 29.8bp
Average Position of motif in Background50.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGAGCYTGTT
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTGTGAGCYTGTT
--GTGACCTT---
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGTGAGCYTGTT---
-GGNGCGNCTGTTNNN
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTGTGAGCYTGTT
--NTGACCTTGA-
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGTGAGCYTGTT
-BNTGDCCTTG--
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGTGAGCYTGTT
-NATGACCTTGA-
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGTGAGCYTGTT
---TGACCTTGAT
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGAGCYTGTT--
NNNNATGACCTTGANTN
 A C G T A C G T G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGAGCYTGTT
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTGTGAGCYTGTT
--ATGACCTTGA-
 G A C T G C A T A C T G G A C T T A C G G C T A A C T G G T A C A G C T A C G T A C T G A G C T A G C T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T