Information for 7-CAATCAGATAGAA (Motif 6)

A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G C T C T G A A C G T A G T C A C G T A C T G C T G A A C G T A C G T C T A G
p-value:1e-16
log p-value:-3.795e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.3 +/- 32.7bp
Average Position of motif in Background56.5 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAATCAGATAGAA
CCAATCAA------
 A C G T A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAATCAGATAGAA--
BAGTCATANTGAAAG
 A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAATCAGATAGAA----
WNAGTCADAVTGAAACTN
 A C G T A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAATCAGATAGAA
--AACAGATGGC-
 A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAATCAGATAGAA
--AACAGATGGT-
 A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAATCAGATAGAA--
CAAATCCAGACATCACA
 A C G T A C G T A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAATCAGATAGAA
---CCAGACAG--
 A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAATCAGATAGAA
--AACAKATGGY-
 A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------CAATCAGATAGAA
AAATGGACCAATCAG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAATCAGATAGAA
---CCAGACRSVB
 A G T C G T C A C G T A A G C T A G T C C G T A A C T G C G T A A G C T C T G A T A C G C G T A C G T A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C