Information for 16-ATTGTTAGTA (Motif 30)

C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T C G T A C G T A A G T C G T C A C G T A A C G T
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets75.4 +/- 18.0bp
Average Position of motif in Background63.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATTGTTAGTA
ATTGTTA---
 C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTTAGTA
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTAGTA--
TAATTGTTCTAAAC
 A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATTGTTAGTA
ATTGTT----
 C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATTGTTAGTA--
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------ATTGTTAGTA-
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTAGTA
CCATTGTTC---
 A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ATTGTTAGTA-
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATTGTTAGTA-
AAAATTGTTATGAA
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTAGTA-
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G A T C G T A A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A