Information for 6-ATTCAAATGC (Motif 3)

C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C
Reverse Opposite:
T C A G A G T C G T C A C G A T G A C T A C G T C T A G G T C A C T G A C G A T
p-value:1e-36
log p-value:-8.418e+01
Information Content per bp:1.868
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif107.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.2 +/- 19.7bp
Average Position of motif in Background51.1 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAAATGC
NATTCAAAT--
 A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAAATGC-
ATATGCAAATNNN
 A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAATGC
TATGCAAAT--
 A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAATGC-
WATGCAAATGAG
 A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTCAAATGC
TTATGCAAAT--
 A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAATGC--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAATGC--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATTCAAATGC
ATATGCAAAT--
 A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ATTCAAATGC--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATTCAAATGC
AATATGCAAATT-
 A C G T A C G T A C G T C G T A A G C T A C G T G A T C C G T A C T G A C G T A A C G T A C T G A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T