Information for 20-GTGGTGCTTAACAAAG (Motif 27)

A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T C T A G C G A T A G C T C G T A C G T A A C T G A G T C C G T A A G T C A G T C G T C A G T A C
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 38.3bp
Average Position of motif in Background60.0 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGGTGCTTAACAAAG-----
----AGAAGAACAAAGGACTA
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGGTGCTTAACAAAG-----
----ATAAGAACAAAGGACTA
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:GTGGTGCTTAACAAAG
----------ACAAAG
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGGTGCTTAACAAAG
-ATTTGCATAACAAAG
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G
A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGGTGCTTAACAAAG
TGAGGGGGATTAACTAT-
 A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGGTGCTTAACAAAG--
-CCTTAGTTAACTAAAAT
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G A C G T A C G T
A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GTGGTGCTTAACAAAG-
---------AACAAAGG
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGGTGCTTAACAAAG
TGAGGGGGATTAACTAT-
 A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GTGGTGCTTAACAAAG-
---------RACAAWGG
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GTGGTGCTTAACAAAG-
-------GGAACAAAGR
 A C T G A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T C T G A C G T A G A T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G