Information for 18-TTGACCAATTCACTTG (Motif 24)

A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C G T A C T G C T G A C T G A A C G T A C G T A C T G A C T G A C G T T A G C C G T A C G T A
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 23.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGACCAATTCACTTG--
--AATCAATTCAATAATT
 A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTGACCAATTCACTTG
TAGTGAACAATAGATTT-
 A C G T A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCAATTCACTTG
ATNNACTAATTACTTT-
 A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCAATTCACTTG
GTTGCGCAAT-------
 A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGACCAATTCACTTG
ATAAACAATTAAACA-
 A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCAATTCACTTG
NNNNNGAACAATTGANN--
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGACCAATTCACTTG
AATGAACAATGGAATT-
 A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGACCAATTCACTTG
TTTAGAACAATAAAAT--
 A C G T A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGACCAATTCACTTG
-TGACCTTTTGACCTC
 A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTGACCAATTCACTTG
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T A T C G C G T A T G A C A G T C C G T A C G T A A G C T A G C T A G T C C G T A G T A C A C G T A C G T A C T G
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C