Information for 12-GGAGATCCTT (Motif 14)

A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
Reverse Opposite:
C G T A C G T A A C T G C T A G C T G A A C G T A G T C A C G T A T G C A T G C
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.846
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif54.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets60.4 +/- 31.2bp
Average Position of motif in Background48.4 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGAGATCCTT
AAGATATCCTT
 A C G T A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAGATCCTT-
-AAGACCCYYN
 A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGATCCTT----
GATAACATCCTAGTAG
 A C G T A C G T A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGAGATCCTT----
----AACCTTATAT
 A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGATCCTT--
--ACATCCTGNT
 A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGATCCTT
CGGAGC-----
 A C G T A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGATCCTT
GGGAGGACNG-
 A C G T A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGATCCTT
-ATAATCCC-
 A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGAGATCCTT
-NACATCTTN
 A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
A C G T C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGAGATCCTT
GGAAATTCCC
 A T C G A T C G C G T A C T A G T G C A G A C T A G T C A G T C G C A T A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C