Information for 9-GGCAAGGCATTGTCAG (Motif 13)

C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G
Reverse Opposite:
T A G C A C G T A C T G C G T A A G T C C G T A C G T A A C G T T A C G A G T C A G T C C G A T A C G T A C T G A G T C A G T C
p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 24.1bp
Average Position of motif in Background40.6 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG
-----CTCATTGTC--
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.58
Offset:9
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG-
---------YTGWCADY
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GGCAAGGCATTGTCAG--
--------VBTGWCAGCB
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:GGCAAGGCATTGTCAG
---------NTGTCAN
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG
------CCWTTGTYYB
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG
-------CTTTGT---
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.56
Offset:10
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG--
----------TGTCANYT
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG
------CCATTGTTYB
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGCAAGGCATTGTCAG--
--CAATGCATTGTGGGTA
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GGCAAGGCATTGTCAG-
---------TTGACAGC
 C T A G A C T G A G T C C G T A C G T A C T A G A C T G A G T C C G T A C G A T A C G T A C T G C G A T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C