Information for 5-CCATATTGAGTGTGGS (Motif 4)

A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
Reverse Opposite:
A T C G G T A C A G T C G T C A A G T C C T G A A G T C C A G T A G T C G T C A C G T A G A C T C G T A A C G T A C T G A C T G
p-value:1e-30
log p-value:-7.100e+01
Information Content per bp:1.800
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 21.1bp
Average Position of motif in Background13.9 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CCATATTGAGTGTGGS
------TGGGTGTGGC
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCATATTGAGTGTGGS
GCNGCCATCTTG--------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCATATTGAGTGTGGS-
-----NTGGGTGTGGCC
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCATATTGAGTGTGGS-
------TGGGTGTGGCN
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

SOX8/MA0868.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCATATTGAGTGTGGS
AACAATGTGCAGTGTT--
 A C G T A C G T A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGAGTGTGGS
ACCATATGGT-------
 A C G T A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCATATTGAGTGTGGS-----
-----NNGCGTGTGTGCNGCN
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCATATTGAGTGTGGS
----RGTGGGYGTGGC
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CCATATTGAGTGTGGS
--------TGCGTG--
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CCATATTGAGTGTGGS--
--------TGCGTGGGYG
 A G T C A G T C C G T A A C G T C T G A G C A T A C G T T A C G G C T A A C T G A G C T A C T G A C G T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G