Information for 14-TGTCAACAAAAGA (Motif 10)

A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
Reverse Opposite:
A C G T A T G C A G C T A C G T A G C T A C G T A C T G A C G T A G C T A C T G C G T A T G A C C G T A
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.862
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.1 +/- 28.5bp
Average Position of motif in Background59.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTCAACAAAAGA-
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxk1/MA0852.1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAAGA
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAAGA
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGTCAACAAAAGA---
AGAAGAACAAAGGACTA
 A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGTCAACAAAAGA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAAGA
TAAATGTAAACAAAGGT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TGTCAACAAAAGA
----RACAAWGG-
 A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAAGA
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAAGA
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGTCAACAAAAGA
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A C G T A A G T C C G T A C T G A C G T A C T G A A T C G C G T A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C