Homer Known Motif Enrichment Results (hs_Embryonic_HUES64_normal_SMAD1_SRX702086_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 734, Total Background Sequences = 47922
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-85-1.961e+020.0000103.014.03%431.30.90%motif file (matrix) svg
2 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-58-1.348e+020.0000226.030.79%4485.79.39%motif file (matrix) svg
3 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-44-1.026e+020.0000195.026.57%4180.88.75%motif file (matrix) svg
4 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-36-8.410e+010.0000125.017.03%2141.14.48%motif file (matrix) svg
5 C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-31-7.207e+010.000089.012.13%1268.32.65%motif file (matrix) svg
6 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-30-7.062e+010.0000172.023.43%4296.48.99%motif file (matrix) svg
7 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-30-6.972e+010.0000129.017.57%2638.45.52%motif file (matrix) svg
8 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-29-6.788e+010.000080.010.90%1085.32.27%motif file (matrix) svg
9 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-27-6.378e+010.0000110.014.99%2120.74.44%motif file (matrix) svg
10 G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer1e-26-6.113e+010.000073.09.95%1003.72.10%motif file (matrix) svg
11 C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-25-5.882e+010.0000100.013.62%1901.33.98%motif file (matrix) svg
12 G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-24-5.695e+010.000060.08.17%720.31.51%motif file (matrix) svg
13 T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-24-5.656e+010.0000106.014.44%2174.84.55%motif file (matrix) svg
14 A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-23-5.402e+010.000079.010.76%1319.62.76%motif file (matrix) svg
15 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-22-5.283e+010.000075.010.22%1219.92.55%motif file (matrix) svg
16 G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-22-5.076e+010.000093.012.67%1871.83.92%motif file (matrix) svg
17 A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-21-4.983e+010.000089.012.13%1755.93.68%motif file (matrix) svg
18 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-20-4.781e+010.000089.012.13%1811.73.79%motif file (matrix) svg
19 C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-8-1.957e+010.000024.03.27%354.80.74%motif file (matrix) svg
20 G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-8-1.953e+010.000036.04.90%743.81.56%motif file (matrix) svg
21 A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-8-1.941e+010.000043.05.86%1004.72.10%motif file (matrix) svg
22 C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-8-1.914e+010.000029.03.95%516.91.08%motif file (matrix) svg
23 C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-7-1.767e+010.000047.06.40%1228.22.57%motif file (matrix) svg
24 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-7-1.746e+010.000075.010.22%2469.75.17%motif file (matrix) svg
25 C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer1e-7-1.734e+010.000041.05.59%1002.22.10%motif file (matrix) svg
26 C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer1e-7-1.707e+010.000037.05.04%858.61.80%motif file (matrix) svg
27 C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-6-1.515e+010.000044.05.99%1214.92.54%motif file (matrix) svg
28 T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-5-1.275e+010.000046.06.27%1421.92.98%motif file (matrix) svg
29 C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-4-9.417e+000.001018.02.45%405.10.85%motif file (matrix) svg
30 C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-3-9.111e+000.001365.08.86%2605.85.45%motif file (matrix) svg
31 G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer1e-3-8.589e+000.002212.01.63%218.20.46%motif file (matrix) svg
32 T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer1e-3-8.441e+000.002515.02.04%326.30.68%motif file (matrix) svg
33 C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-3-8.259e+000.002974.010.08%3164.56.62%motif file (matrix) svg
34 A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-3-7.979e+000.003711.01.50%201.00.42%motif file (matrix) svg
35 C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-3-7.784e+000.004333.04.50%1125.42.36%motif file (matrix) svg
36 C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-3-7.689e+000.0046229.031.20%12270.925.68%motif file (matrix) svg
37 A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-3-7.653e+000.004769.09.40%2964.26.20%motif file (matrix) svg
38 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-3-7.319e+000.006368.09.26%2948.66.17%motif file (matrix) svg
39 C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-3-7.301e+000.006322.03.00%654.51.37%motif file (matrix) svg
40 A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-3-6.941e+000.008868.09.26%2992.86.26%motif file (matrix) svg
41 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-3-6.939e+000.0088150.020.44%7666.016.05%motif file (matrix) svg
42 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-3-6.920e+000.008848.06.54%1936.24.05%motif file (matrix) svg
43 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-2-6.657e+000.0109110.014.99%5382.311.27%motif file (matrix) svg
44 C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-2-6.512e+000.012353.07.22%2238.44.69%motif file (matrix) svg
45 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-2-6.412e+000.0133214.029.16%11632.124.35%motif file (matrix) svg
46 T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer1e-2-6.130e+000.017233.04.50%1246.32.61%motif file (matrix) svg
47 A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-2-5.921e+000.0208107.014.58%5332.611.16%motif file (matrix) svg
48 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer1e-2-5.747e+000.024239.05.31%1584.83.32%motif file (matrix) svg
49 C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-2-5.736e+000.024271.09.67%3312.56.93%motif file (matrix) svg
50 C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-2-5.668e+000.025112.01.63%308.60.65%motif file (matrix) svg
51 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-2-5.567e+000.027357.07.77%2562.15.36%motif file (matrix) svg
52 A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-2-5.513e+000.0282120.016.35%6166.312.91%motif file (matrix) svg
53 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer1e-2-5.500e+000.028247.06.40%2030.14.25%motif file (matrix) svg
54 C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer1e-2-5.459e+000.02877.00.95%129.70.27%motif file (matrix) svg
55 G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.453e+000.028742.05.72%1770.93.71%motif file (matrix) svg
56 T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-2-5.410e+000.029167.09.13%3135.46.56%motif file (matrix) svg
57 T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.281e+000.032527.03.68%1017.32.13%motif file (matrix) svg
58 C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-2-5.235e+000.033434.04.63%1375.62.88%motif file (matrix) svg
59 C G T A C G T A C G T A G C A T G C A T T A C G G T A C G A C T A C T G C G T A A T C G A C G T G T A C C G T A A G C T Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-2-5.200e+000.03405.00.68%72.60.15%motif file (matrix) svg
60 T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-2-5.184e+000.034012.01.63%329.00.69%motif file (matrix) svg
61 C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-2-5.030e+000.039044.05.99%1923.14.03%motif file (matrix) svg
62 T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-2-5.008e+000.039351.06.95%2305.14.82%motif file (matrix) svg
63 T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C Sp1(Zf)/Promoter/Homer1e-2-4.958e+000.040612.01.63%338.30.71%motif file (matrix) svg
64 T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-2-4.874e+000.04355.00.68%78.30.16%motif file (matrix) svg
65 A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-2-4.832e+000.044738.05.18%1625.93.40%motif file (matrix) svg
66 T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-2-4.783e+000.046263.08.58%3002.26.28%motif file (matrix) svg