Information for 8-CACACTGTGC (Motif 5)

A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C
Reverse Opposite:
A C T G A G T C G C T A A G T C C G T A A T C G C G A T A C T G A C G T A T C G
p-value:1e-15
log p-value:-3.471e+01
Information Content per bp:1.750
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.59%
Number of Background Sequences with motif563.3
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets53.1 +/- 26.7bp
Average Position of motif in Background48.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CACACTGTGC--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACACTGTGC
CCTGCTGAGH
 A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACACTGTGC----
TACCCACAATGCATTG
 A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACACTGTGC---
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACACTGTGC--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACACTGTGC--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACACTGTGC
GACAATGNN-
 A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CACACTGTGC
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACACTGTGC--
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CACACTGTGC-
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C G C T A A T G C C G A T T C A G C G A T A C T G T G A C A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A