Information for 18-AGCGGCGCCA (Motif 36)

C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A G T C A C T G A G T C A G T C C T A G A G T C A C G T
p-value:1e-6
log p-value:-1.604e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.3 +/- 19.5bp
Average Position of motif in Background35.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCGCCA-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCGCCA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCGGCGCCA--
TTTGGCGCCAAA
 C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCGCCA----
AAAATGGCGCCATTTT
 A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCGGCGCCA-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCGGCGCCA----
NNNGGGGCGCCCCCNN
 A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCGGCGCCA
-AGCGCGCC-
 C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCGCCA-----
TACGCCCCGCCACTCTG
 A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCGGCGCCA
GGGGGCGGGGCC-
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCGGCGCCA
--CGGAGC--
 C G T A A C T G A G T C A C T G A C T G A G T C A C T G A G T C A G T C C T G A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T