Information for 13-GTTTCGTGCG (Motif 31)

A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A G T C A C T G C T G A C G T A C G T A A G T C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 36.0bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTTCGTGCG-
-TTGCGTGCVA
 A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTTTCGTGCG
--TACGTGCV
 A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTTCGTGCG
-RTACGTGC-
 A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTTCGTGCG--
TTTTCGCGCGAA
 A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCGTGCG
GGGTACGTGC-
 A C G T A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTTTCGTGCG-
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTTCGTGCG------
GGGCCGTGTGCAAAAA
 A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCGTGCG-
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTTCGTGCG
DTTTCCCGCC
 A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCGTGCG---
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C T G A C G T A C G T A G C T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G