Information for 17-CHCCGAGTVGCCGCCC (Motif 25)

A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
Reverse Opposite:
A C T G C T A G C T A G G T A C C T A G A C T G G T A C A G T C G T C A G T A C A G C T A G T C A C T G A C T G C A T G A C T G
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 23.6bp
Average Position of motif in Background34.6 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CHCCGAGTVGCCGCCC
CCCCCCCGGGGGGGT----
 A C G T A C G T A C G T A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CHCCGAGTVGCCGCCC
CCCCCCCGGGGGGGT----
 A C G T A C G T A C G T A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CHCCGAGTVGCCGCCC
--CCGATTGGCT----
 A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CHCCGAGTVGCCGCCC
CCCCCTTGGGCCCC--
 A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CHCCGAGTVGCCGCCC
GCTCCG-----------
 A C G T A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CHCCGAGTVGCCGCCC------
------ATCCCCGCCCCTAAAA
 A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CHCCGAGTVGCCGCCC
CACCCCCGGGGGGG-----
 A C G T A C G T A C G T A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:CHCCGAGTVGCCGCCC---
-------GCTCCGCCCMCY
 A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.47
Offset:-6
Orientation:reverse strand
Alignment:------CHCCGAGTVGCCGCCC
TAGCGCCCCCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CHCCGAGTVGCCGCCC
TCCCCA-----------
 A C G T A G T C G A T C A G T C A G T C A C T G C T G A A C T G A C G T T A C G A C T G A G T C A G T C C A T G A G T C G A T C A G T C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T