Information for 19-GGTACTTTTGCAT (Motif 24)

A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T
Reverse Opposite:
G T C A A C G T A T C G A G T C C G T A C G T A C G T A C T G A C T A G A G C T C G T A G T A C A G T C
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 26.3bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGTACTTTTGCAT--
--TTCATTTGCATAT
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGTACTTTTGCAT--
-----ATTTGCATAA
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GGTACTTTTGCAT--
-----ATTTGCATAT
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTACTTTTGCAT---
-ANATTTTTGCAANTN
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGTACTTTTGCAT----
-TNTAATTTGCATANNN
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGTACTTTTGCAT-
-----ATTTGCATA
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTACTTTTGCAT----
-TNTAATTTGCATACNA
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTACTTTTGCAT----
-TNTAATTTGCATACNA
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTACTTTTGCAT-
--BTVATTWGCATA
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTACTTTTGCAT-
--CTCATTTGCATW
 A C T G A C T G A C G T C T G A A G T C A G C T A C G T A C G T A C G T A C T G A T G C C G T A C A G T A C G T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A