Information for 15-ACTGRCAGTACCT (Motif 18)

G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A G C T G T C A A T G C C G A T A C T G A G C T A G T C C G T A C T A G A C G T
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.739
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif38.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.4 +/- 25.3bp
Average Position of motif in Background53.6 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTGRCAGTACCT---
-ADGGYAGYAGCATCT
 G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T A C G T A C G T A C G T
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTGRCAGTACCT----
ACTCCAAGTACTTGGAA
 G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACTGRCAGTACCT
CAATCACTGGCAGAAT--
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACTGRCAGTACCT
VGCTGWCAVB----
 A C G T G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTGRCAGTACCT---
ATTTACAGTAGCAAAA
 G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTGRCAGTACCT
CCAACTGCCA------
 A C G T A C G T A C G T G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTGRCAGTACCT-
NNATTGACAGGTGCTT
 A C G T A C G T G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACTGRCAGTACCT
NTGATTGACAGN----
 A C G T A C G T A C G T G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACTGRCAGTACCT
RHTGWCAR-----
 G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACTGRCAGTACCT
BTGABTGACAGS----
 A C G T A C G T A C G T G T C A A G T C A C G T C T A G T C G A A G T C C G T A A T C G A C G T C T G A T A G C A G T C C G A T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T