Information for 13-TCCTGCTTTTGTG (Motif 13)

A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C C G T A C T G A C G T A C G T A A C T G A G T C C G T A A C T G A C T G G T C A
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 25.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCTGCTTTTGTG
ACATCCTGNT------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTTTTGTG
CCCCCTGCTGTG---
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTTTTGTG
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TCCTGCTTTTGTG
-----CCWTTGTY
 A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TCCTGCTTTTGTG--
-----CCTTTGTTTT
 A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCCTGCTTTTGTG---
TNNTGCTACTGTNNNN
 A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCCTGCTTTTGTG-----
--NNNNTTGTGTGCTTNN
 A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTTTTGTG-
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCCTGCTTTTGTG-
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGCTTTTGTG
ACTTCCTGNT------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G C T A C G T A C T G A C G T A C T G
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T