Information for 12-GCCGAATAACAAA (Motif 12)

A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 23.2bp
Average Position of motif in Background58.3 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCCGAATAACAAA---
-AAAAATAACAAACGG
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0186.1_Tcf3_2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCCGAATAACAAA-
AGCCGAAAAAAAAAT
 A C G T A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCGAATAACAAA------
--AGAAGAACAAAGGACTA
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCGAATAACAAA------
--ATAAGAACAAAGGACTA
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCGAATAACAAA--
AACAAACAACAAGAG
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCCGAATAACAAA
-------AACAAT
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCGAATAACAAA--
AACCCAATAAAATTCG
 A C G T A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCGAATAACAAA---
-CCGTATTATAAACAA
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCGAATAACAAA----
---AAATAAGAAAAAAC
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCGAATAACAAA--
-----RNAACAATGG
 A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G