p-value: | 1e-111 |
log p-value: | -2.566e+02 |
Information Content per bp: | 1.607 |
Number of Target Sequences with motif | 119.0 |
Percentage of Target Sequences with motif | 16.21% |
Number of Background Sequences with motif | 385.9 |
Percentage of Background Sequences with motif | 0.81% |
Average Position of motif in Targets | 53.3 +/- 24.1bp |
Average Position of motif in Background | 49.4 +/- 29.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 1 |
Score: | 0.94 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTGCATDASAAAAG ATTTGCATAACAAAG- |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 2 |
Score: | 0.93 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTTGCATDASAAAAG ATTTGCATAACAATG- |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.77 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTTGCATDASAAAAG ATTTGCATAA------ |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 4 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATTTGCATDASAAAAG TAATTTGCATAA------ |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTGCATDASAAAAG BTVATTWGCATA------- |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTGCATDASAAAAG ATTTGCATA------- |
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POU2F1/MA0785.1/Jaspar
Match Rank: | 7 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATTTGCATDASAAAAG AATTTGCATANT----- |
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POU3F2/MA0787.1/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATTTGCATDASAAAAG TAATTTGCATAA------ |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 9 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTGCATDASAAAAG TNTAATTTGCATACNA---- |
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PH0145.1_Pou2f3/Jaspar
Match Rank: | 10 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTGCATDASAAAAG TNTAATTTGCATACNA---- |
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