Information for 8-CGACTAGTCGCCG (Motif 8)

A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G
Reverse Opposite:
A T G C C T A G A T C G A G T C A T C G G T C A A G T C A C G T C T G A A C T G A G C T A T G C A C T G
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.831
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 25.2bp
Average Position of motif in Background31.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGACTAGTCGCCG----
NNNNTTGGCGCCGANNN
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGACTAGTCGCCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGACTAGTCGCCG
TGTCTAGACG---
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGACTAGTCGCCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGACTAGTCGCCG----
NNNNTTGGCGCCGANNN
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGACTAGTCGCCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGACTAGTCGCCG
---CTAATCGNT-
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G
A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGACTAGTCGCCG--
NNTTTANNCGACGNA
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

E2F1/MA0024.3/Jaspar

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CGACTAGTCGCCG--
---TTTGGCGCCAAA
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CGACTAGTCGCCG
---CCAGACRSVB
 A G T C A T C G T C G A A G T C A G C T C G T A A C T G A C G T A T G C A C T G A T G C A G T C A T C G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C