Information for 6-TGYTAATCCC (Motif 3)

C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G T C A G G T C A A C G T A G C T C T G A C T A G T A G C G C T A
p-value:1e-17
log p-value:-3.920e+01
Information Content per bp:1.699
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif219.9
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets52.5 +/- 23.7bp
Average Position of motif in Background48.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.90
Offset:1
Orientation:forward strand
Alignment:TGYTAATCCC
-CTTAATCCC
 C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TGYTAATCCC-----
NTTGTTAATCCCTCTNN
 A C G T A C G T C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.90
Offset:3
Orientation:forward strand
Alignment:TGYTAATCCC-
---TAATCCCN
 C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---TGYTAATCCC---
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TGYTAATCCC-
-GCTAATCCCC
 C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TGYTAATCCC-
-NYTAATCCYB
 C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.89
Offset:2
Orientation:forward strand
Alignment:TGYTAATCCC
--TTAATCCC
 C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--TGYTAATCCC-----
ATAGTTAATCCCCCNNA
 A C G T A C G T C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGYTAATCCC-----
NTAGTTAATCCCCTTAN
 A C G T A C G T C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TGYTAATCCC
--YTAATCCY
 C G A T A T C G G A T C A G C T C T G A G T C A A C G T A G T C A G T C A G T C
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C