Information for 5-CCGTAGAGCACGC (Motif 5)

A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G A C G T C T A G A G T C A C G T A T G C A C G T C T G A A G T C A C T G A C T G
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.903
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.9 +/- 20.2bp
Average Position of motif in Background49.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CCGTAGAGCACGC-
--------CACGCA
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGTAGAGCACGC--
CCACACAGCAGGAGA
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCGTAGAGCACGC
GCCTCAGGGCAT--
 A C G T A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCGTAGAGCACGC
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCGTAGAGCACGC--
GAGCACAGCAGGACA
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCGTAGAGCACGC--
CCACACAGCAGGAGA
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCGTAGAGCACGC------
--TTNGGGTACGCCNNANN
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CCGTAGAGCACGC-
------AGCGCGCC
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CCGTAGAGCACGC--
-----TBGCACGCAA
 A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CCGTAGAGCACGC
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A C T G A G C T C G T A A T C G C G T A C T A G A G T C C G T A T A G C A C T G A G T C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T