Information for 3-CWKTTGCAWATGC (Motif 4)

T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
Reverse Opposite:
C A T G T A G C C G T A G A C T C G A T A C G T C A T G T A G C C G T A C T G A T G C A C G A T A T C G
p-value:1e-13
log p-value:-3.218e+01
Information Content per bp:1.614
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif565.2
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets50.8 +/- 21.4bp
Average Position of motif in Background49.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CWKTTGCAWATGC
-ATTTGCATAT--
 T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CWKTTGCAWATGC
TTCATTTGCATAT--
 A C G T A C G T T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CWKTTGCAWATGC
-ATTTGCATAA--
 T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CWKTTGCAWATGC
---ATGMATATDC
 T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CWKTTGCAWATGC
AATTTGCATANT-
 T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CWKTTGCAWATGC
-ATTTGCATA---
 T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CWKTTGCAWATGC--
TTGTATGCAAATTAGA
 A C G T T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CWKTTGCAWATGC--
TTGTATGCAAATTAGA
 A C G T T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CWKTTGCAWATGC
TAATTTGCATAA--
 A C G T T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CWKTTGCAWATGC--
TTGTATGCAAATTAGA
 A C G T T A G C C G T A A C G T G A C T A C G T A T C G G T A C C G T A C G T A C T G A C G A T A T C G G T A C A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A