Information for 2-GCCGGSAGGGGGCGSS (Motif 3)

A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G
Reverse Opposite:
T A G C A T C G A G T C A T C G A G T C A G T C T G A C A G T C G T A C A G C T T A G C A T G C A G T C C T A G A C T G T A G C
p-value:1e-14
log p-value:-3.358e+01
Information Content per bp:1.648
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif917.0
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets51.0 +/- 23.0bp
Average Position of motif in Background49.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCCGGSAGGGGGCGSS----
GCCASCAGGGGGCGCYVNNG
 A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GCCGGSAGGGGGCGSS-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGSAGGGGGCGSS--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCCGGSAGGGGGCGSS---
--NNNAAGGGGGCGGGNNN
 A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCGGSAGGGGGCGSS--
---GGGNGGGGGCGGGGC
 A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T A C G T
A C G T A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCCGGSAGGGGGCGSS--
----GGCGGGGGCGGGGG
 A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCCGGSAGGGGGCGSS
--ANTGCGGGGGCGGN
 A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G
A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGSAGGGGGCGSS
NCNCAGCGGGGGGTC--
 A C G T A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCGGSAGGGGGCGSS
CACCCCCGGGGGGG----
 A C G T A C G T A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GCCGGSAGGGGGCGSS--
------RGKGGGCGKGGC
 A T C G G T A C A G T C C T A G A T C G A T C G T C G A A C T G T C A G A C T G A C T G T A C G A T G C T A C G A T G C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C