Information for 6-TTCAAGGGCG (Motif 13)

A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G
Reverse Opposite:
G A T C A C T G G T A C A G T C A G T C A C G T A C G T T C A G C T G A G T C A
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.844
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif57.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets74.7 +/- 20.2bp
Average Position of motif in Background52.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TTCAAGGGCG
NTCAAGGTCA
 A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TTCAAGGGCG--
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTCAAGGGCG-
TTCAAGGTCAT
 A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTCAAGGGCG
BTCAAGGTCA
 A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TTCAAGGGCG
AGGTCAAGGTCA
 A C G T A C G T A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTCAAGGGCG-----
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTCAAGGGCG
AGGTCAAGGTCA
 A C G T A C G T A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTCAAGGGCG--
-TCAAGGTCATA
 A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTCAAGGGCG-
-TCAAGGTCAT
 A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTCAAGGGCG-
-TCAAGGTCAN
 A C G T A G C T A G T C G T C A C G T A C T A G A C T G A C T G A G T C C T A G A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C