Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-65 | -1.518e+02 | 0.0000 | 62.0 | 7.01% | 121.3 | 0.25% | motif file (matrix) |
svg |
2 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-33 | -7.625e+01 | 0.0000 | 53.0 | 6.00% | 303.4 | 0.63% | motif file (matrix) |
svg |
3 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-28 | -6.519e+01 | 0.0000 | 40.0 | 4.52% | 187.9 | 0.39% | motif file (matrix) |
svg |
4 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-21 | -5.050e+01 | 0.0000 | 40.0 | 4.52% | 281.5 | 0.58% | motif file (matrix) |
svg |
5 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-20 | -4.818e+01 | 0.0000 | 41.0 | 4.64% | 318.7 | 0.66% | motif file (matrix) |
svg |
6 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-16 | -3.883e+01 | 0.0000 | 29.0 | 3.28% | 190.6 | 0.39% | motif file (matrix) |
svg |
7 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-16 | -3.755e+01 | 0.0000 | 64.0 | 7.24% | 1016.9 | 2.11% | motif file (matrix) |
svg |
8 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-9 | -2.085e+01 | 0.0000 | 78.0 | 8.82% | 2012.2 | 4.17% | motif file (matrix) |
svg |
9 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-8 | -1.927e+01 | 0.0000 | 77.0 | 8.71% | 2049.2 | 4.24% | motif file (matrix) |
svg |
10 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.769e+01 | 0.0000 | 63.0 | 7.13% | 1596.7 | 3.31% | motif file (matrix) |
svg |
11 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-7 | -1.759e+01 | 0.0000 | 67.0 | 7.58% | 1750.2 | 3.62% | motif file (matrix) |
svg |
12 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-5 | -1.365e+01 | 0.0000 | 86.0 | 9.73% | 2738.0 | 5.67% | motif file (matrix) |
svg |
13 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-5 | -1.253e+01 | 0.0001 | 44.0 | 4.98% | 1125.7 | 2.33% | motif file (matrix) |
svg |
14 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-5 | -1.253e+01 | 0.0001 | 41.0 | 4.64% | 1015.0 | 2.10% | motif file (matrix) |
svg |
15 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-5 | -1.178e+01 | 0.0002 | 33.0 | 3.73% | 760.1 | 1.57% | motif file (matrix) |
svg |
16 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.019e+01 | 0.0009 | 167.0 | 18.89% | 6772.2 | 14.02% | motif file (matrix) |
svg |
17 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -9.124e+00 | 0.0023 | 214.0 | 24.21% | 9235.6 | 19.12% | motif file (matrix) |
svg |
18 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-3 | -8.882e+00 | 0.0028 | 25.0 | 2.83% | 591.2 | 1.22% | motif file (matrix) |
svg |
19 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -8.849e+00 | 0.0028 | 38.0 | 4.30% | 1080.8 | 2.24% | motif file (matrix) |
svg |
20 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -8.304e+00 | 0.0045 | 23.0 | 2.60% | 543.4 | 1.13% | motif file (matrix) |
svg |
21 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.227e+00 | 0.0046 | 36.0 | 4.07% | 1036.3 | 2.15% | motif file (matrix) |
svg |
22 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -7.769e+00 | 0.0070 | 24.0 | 2.71% | 601.1 | 1.24% | motif file (matrix) |
svg |
23 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -7.620e+00 | 0.0078 | 39.0 | 4.41% | 1193.0 | 2.47% | motif file (matrix) |
svg |
24 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.521e+00 | 0.0082 | 25.0 | 2.83% | 649.8 | 1.35% | motif file (matrix) |
svg |
25 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-3 | -7.446e+00 | 0.0085 | 11.0 | 1.24% | 179.6 | 0.37% | motif file (matrix) |
svg |
26 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -7.359e+00 | 0.0089 | 32.0 | 3.62% | 927.0 | 1.92% | motif file (matrix) |
svg |
27 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -7.104e+00 | 0.0111 | 71.0 | 8.03% | 2624.6 | 5.43% | motif file (matrix) |
svg |
28 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -5.899e+00 | 0.0357 | 4.0 | 0.45% | 31.8 | 0.07% | motif file (matrix) |
svg |
29 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.793e+00 | 0.0383 | 13.0 | 1.47% | 288.0 | 0.60% | motif file (matrix) |
svg |
30 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.782e+00 | 0.0383 | 142.0 | 16.06% | 6200.7 | 12.84% | motif file (matrix) |
svg |
31 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.768e+00 | 0.0383 | 27.0 | 3.05% | 821.1 | 1.70% | motif file (matrix) |
svg |
32 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.733e+00 | 0.0383 | 33.0 | 3.73% | 1072.6 | 2.22% | motif file (matrix) |
svg |
33 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.678e+00 | 0.0383 | 8.0 | 0.90% | 132.1 | 0.27% | motif file (matrix) |
svg |
34 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.415e+00 | 0.0477 | 261.0 | 29.52% | 12353.7 | 25.58% | motif file (matrix) |
svg |
35 |
| KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.208e+00 | 0.0569 | 48.0 | 5.43% | 1774.9 | 3.68% | motif file (matrix) |
svg |
36 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.103e+00 | 0.0614 | 227.0 | 25.68% | 10659.5 | 22.07% | motif file (matrix) |
svg |
37 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -4.999e+00 | 0.0664 | 72.0 | 8.14% | 2912.6 | 6.03% | motif file (matrix) |
svg |
38 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.932e+00 | 0.0691 | 19.0 | 2.15% | 549.4 | 1.14% | motif file (matrix) |
svg |
39 |
| ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.856e+00 | 0.0726 | 46.0 | 5.20% | 1719.8 | 3.56% | motif file (matrix) |
svg |
40 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.767e+00 | 0.0774 | 9.0 | 1.02% | 187.4 | 0.39% | motif file (matrix) |
svg |
41 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -4.640e+00 | 0.0858 | 9.0 | 1.02% | 191.5 | 0.40% | motif file (matrix) |
svg |