Information for 5-TTCTTTTGTCAYT (Motif 6)

G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T
Reverse Opposite:
T C G A T C G A C A G T C T A G T G C A A G T C C G T A C T G A C G T A C G T A T C A G G T C A C T G A
p-value:1e-15
log p-value:-3.478e+01
Information Content per bp:1.706
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif244.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets51.3 +/- 26.2bp
Average Position of motif in Background50.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTTTGTCAYT
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTCTTTTGTCAYT
--CCTTTGTTTT-
 G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTTTGTCAYT--
TNNTCCTTTGTTCTNNT
 A C G T A C G T G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTTTGTCAYT--
NNNTCCTTTGTTCTNNN
 A C G T A C G T G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTCTTTTGTCAYT---
-NCNTTTGTTATTTNN
 G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T A C G T A C G T A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTTTGTCAYT
NNTTTTGTTTTGATNT-
 A C G T A C G T A C G T A C G T G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTCTTTTGTCAYT
--CCWTTGTY---
 G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTTTGTCAYT--
ANTCCTTTGTCTNNNN
 A C G T G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTTTGTCAYT-
ANATTTTTGCAANTN
 A C G T G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTCTTTTGTCAYT
--CCATTGTTNY-
 G A C T A C G T A G T C C G A T A C G T A G C T G A C T A C T G A C G T G A T C G T C A A G C T A G C T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T