Information for 22-GGCCTTTTKTGAG (Motif 33)

A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
Reverse Opposite:
T A G C A G C T A T G C G C T A G T A C C G T A C G T A C T G A C T G A C T A G T A C G A G T C G T A C
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.814
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.4 +/- 22.7bp
Average Position of motif in Background34.9 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGCCTTTTKTGAG
---CCWTTGTY--
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCTTTTKTGAG
AGGVNCCTTTGT---
 A C G T A C G T A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGCCTTTTKTGAG
---NTTTTATGAC
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGCCTTTTKTGAG
---NTTTTACGAC
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCCTTTTKTGAG
---CCTTTGTT--
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGCCTTTTKTGAG-
----TTTTATKRGG
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCCTTTTKTGAG-
----TTTTATTRGN
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCCTTTTKTGAG
---CCTTTGTTTT
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCCTTTTKTGAG--
----TTTTATGGCTN
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCCTTTTKTGAG--
GTNTTGTTGTGANNT
 A C T G T C A G A T G C A G T C A G C T A G C T A C G T A C G T A C T G C A G T A T C G C T G A A T C G A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T