Information for 19-AGGTCAGCTCTGT (Motif 31)

C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C G T C A C T A G C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 29.9bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGCTCTGT
TRAGGTCA-------
 A C G T A C G T C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGTCAGCTCTGT
AGGTCA-------
 C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGTCAGCTCTGT
ATCAAGGTCA-------
 A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGTCAGCTCTGT
-NGTCAGCANTTT
 C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGCTCTGT
AGRGGTCA-------
 A C G T A C G T C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGTCAGCTCTGT
--GTCAGCANNTN
 C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGTCAGCTCTGT
CAAAGGTCAG------
 A C G T A C G T A C G T C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGCTCTGT
AAGGTCAC------
 A C G T C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGTCAGCTCTGT--
AAGTCAGCANTTTTN
 C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCAGCTCTGT
TCAAGGTCAN------
 A C G T A C G T A C G T C G T A C T A G A C T G A C G T G T A C C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T